Annotated protein:Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding protein 1). Gene symbol: HNRNPD. Taxonomy: Mus musculus (Mouse). Uniprot ID: Q60668
antibody wiki:
SynGO gene info:SynGO data @ HNRNPD
Ontology domain:Cellular Component
SynGO term:synapse (GO:0045202)
Synapse type(s):brain
Annotated paper:Trinidad JC, et al. "Comprehensive identification of phosphorylation sites in postsynaptic density preparations" Mol Cell Proteomics. 2006 May;5(5):914-22 PMID:16452087
Figure(s):Suppl. Table S1
Annotation description:The supplemental table S1 contains proteins identified in the PSD preparation (Synaptic junctional protein preparation).
For proteins coming from datasets derived from PSD (detergent-resistant synaptic junctions) preparations without defined selection / enrichment of the pre- or postsynaptic compartment we cannot assign these proteins to excitatory and/or inhibitory nor to the presynapse or / and postsynapse without further information.
Evidence tracking, Biological System:Intact tissue
Evidence tracking, Protein Targeting:none of the above
Evidence tracking, Experiment Assay:Mass-spectrometry
Biochemical fractionation (generic)
Annotator(s):Daniela Dieterich (ORCID:0000-0002-9880-1214)
Rainer Pielot (ORCID:0000-0002-9681-3318)
Karl-Heinz Smalla (ORCID:0000-0002-0269-0311)
Eckart Gundelfinger (ORCID:0000-0001-9377-7414)
Lab:Leibniz Institute for Neurobiology (LIN), Institute of Pharmacology and Toxicology, Otto von Guericke University, Center for Behavioral Brain Sciences (CBBS), Magdeburg, Germany
Additional literature:The protein was also identified in a study investigating PSD proteins in cortical primary cultures. There it seems to be regulated depending on synaptic activity. @ PMID:22238095
SynGO annotation ID:651
Dataset release (version):20231201
View annotation as GO-CAM model:Gene Ontology