Annotated protein:RCG36947 (Rap2A-like protein). Gene symbol: RAP2A. Taxonomy: Rattus norvegicus (Rat). Uniprot ID: Q78P65
antibody wiki:
SynGO gene info:SynGO data @ RAP2A
Ontology domain:Cellular Component
SynGO term:synapse (GO:0045202)
Synapse type(s):forebrain
Annotated paper:Kawabe H, et al. "Regulation of Rap2A by the ubiquitin ligase Nedd4-1 controls neurite development" Neuron. 2010 Feb 11;65(3):358-72 PMID:20159449
Figure(s):Fig. S1E
Annotation description:Figure S1: Subcellular fractionation data from rat brain indicates that RAP2A is present in the PSD fraction.
11/01/2021 Dnyanada: RAP2A distribution is not limited to the PSD fraction but is also present in the synaptosomal (P2B), ER membrane/microsome (P2C), crude synaptic vesicle fraction (CSV) and crude synaptic membrane fraction (CSM). Based on this homogenous pattern of distribution in rat brain subcellular fractions, the generic term "synapse" was chosen.
Evidence tracking, Biological System:Intact tissue
Evidence tracking, Protein Targeting:Antibody (detection)
Evidence tracking, Experiment Assay:Western blot
Biochemical fractionation (generic)
Annotator(s):Noa Lipstein (ORCID:0000-0002-0755-5899)
Cordelia Imig (ORCID:0000-0001-7351-8706)
Vincent O'connor (ORCID:0000-0003-3185-5709)
Nils Brose (ORCID:0000-0003-0938-8534)
Lab:Department of Molecular Neurobiology, Max Planck Institute of Experimental Medicine, 37075 Göttingen, Germany
SynGO annotation ID:3973
Dataset release (version):20231201
View annotation as GO-CAM model:Gene Ontology