| Annotated protein: | Small ribosomal subunit protein uS15 (40S ribosomal protein S13). Gene symbol: RPS13. Taxonomy: Rattus norvegicus (Rat). Uniprot ID: P62278 |
| antibody wiki: | |
| SynGO gene info: | SynGO data @ RPS13 |
| Ontology domain: | Cellular Component |
| SynGO term: | synapse (GO:0045202) |
| Synapse type(s): | forebrain |
| Annotated paper: | Peng J, et al. "Semiquantitative proteomic analysis of rat forebrain postsynaptic density fractions by mass spectrometry" J Biol Chem. 2004 May 14;279(20):21003-11 PMID:15020595 |
| Figure(s): | Table S1 |
| Annotation description: | 374 different proteins that copurify with a PSD fraction where identfied by LC-MS/MS. RS6_RAT was found among these proteins. For proteins coming from datasets derived from PSD (detergent-resistant synaptic junctions) preparations without defined selection / enrichment of the pre- or postsynaptic compartment we cannot assign these proteins to excitatory and/or inhibitory nor to the presynapse or / and postsynapse without further information. 13/10/2017 Pim - Listed as RS6_HUMAN in Table S1 (incorrectly restricted proteomics search settings) |
| Evidence tracking, Biological System: | Intact tissue |
| Evidence tracking, Protein Targeting: | none of the above |
| Evidence tracking, Experiment Assay: | Mass-spectrometry Biochemical fractionation (generic) |
| Annotator(s): | Daniela Dieterich (ORCID:0000-0002-9880-1214) Rainer Pielot (ORCID:0000-0002-9681-3318) Karl-Heinz Smalla (ORCID:0000-0002-0269-0311) Eckart Gundelfinger (ORCID:0000-0001-9377-7414) |
| Lab: | Leibniz Institute for Neurobiology (LIN), Institute of Pharmacology and Toxicology, Otto von Guericke University, Center for Behavioral Brain Sciences (CBBS), Magdeburg, Germany |
| Additional literature: | Fig. 2 demonstrates the localization of polyribosomes in the base, neck and head of spines. @ PMID:12165474 |
| SynGO annotation ID: | 1636 |
| Dataset release (version): | 20231201 |
| View annotation as GO-CAM model: |  |